Some info from "The Reef Aquarium" by J. Charles Delbeek and Julian Sprung: First, any of the negative impacts they discuss are with respect to corals (which you said you don't have). Second, flatworms are not uncommon in a new tank, and once conditions stabilize, they may go away. If it's an established tank, increasing the specific gravity above 1.022 can rid you of them (but would be bad for certain corals). Third, certain wrasses (six-lined, yellow, maybe others) and bottom sifting gobies have been known to eat them. Fourth, some species are attracted to light and may be siphoned off when they collect at a single light point. Finally, if they congregate on a single host (for us, it was corals), then a fresh water dip will remove them. If dipping corals, it should only be 5-10 seconds, and some recover better than others (great on our hammer, frogspawn and galaxia, terrible on our daisy- our daisy we ended up squirting with freshwater in the tank using a syringe and scooping the critter with a net). Hope that helps out with what to do to get rid of them.
-Renee