well, rove, it would seem that on one hand it would. but, i do believe some hard coral frags were mentioned, thusly, i would conclude that they might be desirable.
if these things weren't present, then i'd suggest nixing the lighting altogether, l/r doesn't require light, nor do the benthics. but, if it's really good l/r (and it sounds like this is), then you'd probably want to keep the "freebies" that came along with. thusly, i'm with the others, keep ammo oxidation readings to levels that you won't kill off all these goodies, and use the lights.